On the Path-length Matrices of Unrooted Binary Trees

Published: March 11, 2026
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Abstract

An Unrooted Binary Tree (UBT) is a connected acyclic graph with internal vertices of degree 3. The Path-Length Ma-trix (PLM) of a UBT with n leaves encodes, for each pair of leaves i and j, the number of edges in the unique path between i and j. PLMs arise naturally in clustering and computational biolo-gy. A key example is the Balanced Minimum Evolution Problem (BMEP), an NP-hard optimization problem on PLMs for phylogenetic inference. From a topological standpoint, UBTs correspond to the facets of the simplicial complex ob-tained by intersecting the tropical Grassmannian with a unit hypersphere. In this talk, we deal with UBTs from a purely combinatorial standpoint. Building upon prior work, we show that one can characterize the PLMs of UBTs for n ≤ 11. We also describe spectral properties of PLMs by tracing connections between some tree substructures and specific eigenvalues of the associated PLMs.

Published in Abstract Book of the CNR IMATI Workshop
Page(s) 11-11
Creative Commons

This is an Open Access abstract, distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution and reproduction in any medium or format, provided the original work is properly cited.

Copyright

Copyright © The Author(s), 2026. Published by Science Publishing Group

Keywords

Combinatorial Optimization, Unrooted Binary Trees, Balanced Minimum Evolution